Can you please attach your relevant override files? They are in /home/ratijas/.local/share/flatpak/overrides/ (global and com.valvesoftware.Steam) and maybe also system ones in /var/lib/flatpak/overrides/

Also please paste the output of

$ flatpak info -M com.valvesoftware.Steam

The thing is, before the last upgrade all this was fairly broken, so unchecking those boxes might have led to unpredictable bad configurations. Not sure how it got picked by FlatSeal vs flatpak-kcm after all these fixes. We are preserving any unknown entries loaded from user overrides, even (currently) clearly invalid ones, for future compatibility reasons. Although the ones shown on the screenshot don't look broken at all.

With a fresh install I see all three folders in both apps (flatpak-kcm and FlatSeal). And if I set them to OFF in flatpak-kcm, they disappear from FlatSeal (which arguably kinda makes sense, even if is confusing to power users).

Created attachment 159153 [details]
Steam override file in /home/user/.local/share/flatpak/overrides/

(In reply to ratijas from comment #1)
> Can you please attach your relevant override files? They are in
> /home/ratijas/.local/share/flatpak/overrides/ (global and
> com.valvesoftware.Steam) and maybe also system ones in
> /var/lib/flatpak/overrides/
> 
> Also please paste the output of
> 
> $ flatpak info -M com.valvesoftware.Steam
> 
> The thing is, before the last upgrade all this was fairly broken, so
> unchecking those boxes might have led to unpredictable bad configurations.
> Not sure how it got picked by FlatSeal vs flatpak-kcm after all these fixes.
> We are preserving any unknown entries loaded from user overrides, even
> (currently) clearly invalid ones, for future compatibility reasons. Although
> the ones shown on the screenshot don't look broken at all.
> 
> With a fresh install I see all three folders in both apps (flatpak-kcm and
> FlatSeal). And if I set them to OFF in flatpak-kcm, they disappear from
> FlatSeal (which arguably kinda makes sense, even if is confusing to power
> users).

See above for the Steam override file. I have not set any global overrides. Also, I don't think I have any system overrides since there isn't an 'overrides' folder in the /var/lib/flatpak/ directory.

Finally, here's the output you requested:

[user@fedora ~]$ flatpak info -M com.valvesoftware.Steam
F: Filesystem suffix "ro" is not applicable for --nofilesystem
F: Filesystem suffix "ro" is not applicable for --nofilesystem
[Context]
shared=network;ipc;
sockets=x11;wayland;pulseaudio;
devices=dri;
features=devel;multiarch;per-app-dev-shm;
filesystems=xdg-run/app/com.discordapp.Discord:create;
persistent=.;
unset-environment=ALSA_CONFIG_PATH;TZ;STEAM_RUNTIME_PREFER_HOST_LIBRARIES;STEAM_RUNTIME;SDL_VIDEODRIVER;MESA_GLSL_CACHE_DIR;

[Session Bus Policy]
org.kde.StatusNotifierWatcher=talk
org.freedesktop.Notifications=talk
org.gnome.SettingsDaemon.MediaKeys=talk
org.freedesktop.ScreenSaver=talk
org.freedesktop.PowerManagement=talk

[System Bus Policy]
org.freedesktop.UPower=talk
org.freedesktop.UDisks2=talk

[Environment]
ALSA_CONFIG_PATH=
TZ=
STEAM_EXTRA_COMPAT_TOOLS_PATHS=/app/share/steam/compatibilitytools.d:/app/utils/share/steam/compatibilitytools.d
PYTHONPATH=/app/utils/lib/python3.10/site-packages
LC_NUMERIC=C
LC_MONETARY=C
FLATPAK_STEAM_UPDATE_SYMLINKS=0
DBUS_FATAL_WARNINGS=0
STEAM_RUNTIME_PREFER_HOST_LIBRARIES=
FLATPAK_STEAM_XDG_DIRS_PREFIX=~/.var/app/com.valvesoftware.Steam
LC_TELEPHONE=C
SSL_CERT_DIR=/etc/ssl/certs
STEAM_RUNTIME=
LC_MEASUREMENT=C
XDG_DATA_DIRS=/app/share:/usr/lib/extensions/vulkan/share:/usr/share:/usr/share/runtime/share:/run/host/user-share:/run/host/share
LC_NAME=C
XDG_CONFIG_DIRS=/etc/xdg:/usr/lib/x86_64-linux-gnu/GL:/usr/lib/i386-linux-gnu/GL
LC_COLLATE=C
SDL_VIDEODRIVER=
GST_PLUGIN_SYSTEM_PATH=/app/lib/gstreamer-1.0:/app/lib32/gstreamer-1.0:/usr/lib/extensions/gstreamer-1.0:/usr/lib/x86_64-linux-gnu/gstreamer-1.0:/usr/lib/i386-linux-gnu/gstreamer-1.0
MESA_GLSL_CACHE_DIR=
LC_ADDRESS=C
PATH=/app/bin:/app/utils/bin:/usr/bin
PROTON_DEBUG_DIR=/var/tmp

OK, so the error message from flatpak CLI is a bit misleading (it "thinks" that you are trying to set permissions with command arguments like `--nofilesystem` when in fact you are just requesting printing them out), but what matter is that flatpak rightfully fails to parse this:

filesystems=!xdg-music:ro;!xdg-pictures:ro

because mixing negation `!` and any of the :suffix modes is not well-defined. This is most likely a leftover from our previous buggy version.

In this broken case it doesn't matter how FlatSeal interprets it. It's just plainly invalid. There's only so much we could do about it now. I suggest dropping that overrides file and start from scratch.

(not sure how to classify this bug report, but I guess it's RESOLVED/FIXED since we *did fix* generator of override files, so things like this should never happen again)

(In reply to ratijas from comment #4)
> OK, so the error message from flatpak CLI is a bit misleading (it "thinks"
> that you are trying to set permissions with command arguments like
> `--nofilesystem` when in fact you are just requesting printing them out),
> but what matter is that flatpak rightfully fails to parse this:
> 
> filesystems=!xdg-music:ro;!xdg-pictures:ro
> 
> because mixing negation `!` and any of the :suffix modes is not
> well-defined. This is most likely a leftover from our previous buggy version.
> 
> In this broken case it doesn't matter how FlatSeal interprets it. It's just
> plainly invalid. There's only so much we could do about it now. I suggest
> dropping that overrides file and start from scratch.
> 
> (not sure how to classify this bug report, but I guess it's RESOLVED/FIXED
> since we *did fix* generator of override files, so things like this should
> never happen again)

Thank you for looking into this. Yes, shortly after I submitted the bug report, I realized that I can "work around" this bug by simply resetting the modified permissions using the 'Default' button in Flatpak KCM or the 'Reset' button in Flatseal. The result would be as if the bug I reported did not occur.

Again, thanks for looking into this and for your contributions to making an intuitive GUI for managing Flatpak permissions natively on KDE!