Bug 384921 - FIXED in git: assignment of an object not possible
Summary: FIXED in git: assignment of an object not possible
Status: RESOLVED FIXED
Alias: None
Product: rkward
Classification: Applications
Component: general (show other bugs)
Version: unspecified
Platform: unspecified Linux
: NOR major
Target Milestone: ---
Assignee: RKWard Team
URL:
Keywords:
Depends on:
Blocks:
 
Reported: 2017-09-21 08:24 UTC by Jan
Modified: 2020-05-03 20:19 UTC (History)
1 user (show)

See Also:
Latest Commit:
Version Fixed In:
Sentry Crash Report:


Attachments
saved object from R terminal (293 bytes, application/rdata)
2017-09-21 08:40 UTC, Jan
Details

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Description Jan 2017-09-21 08:24:21 UTC
R version 3.4.1
rkward_0.6.5

This other software outside of R is required:
- Python
- TensorFlow
- Keras

code example:

library(keras)

layer_input(shape=c(100))
> Tensor("input_9:0", shape=(?, 100), dtype=float32)

input_1 <- layer_input(shape=c(100))
> Error: (list) object cannot be coerced to type 'integer'
> Warning in .rk.get.structure.global("input_1") :
> failure to get object input_1

In a plain R terminal this works flawlessly.
Comment 1 Jan 2017-09-21 08:40:17 UTC
Created attachment 107929 [details]
saved object from R terminal
Comment 2 Thomas Friedrichsmeier 2018-03-25 19:48:16 UTC
Hi!

Thanks for reporting, and sorry about the terrible delay.

This works for me in the current development version of RKWard (KF5-based; version number 0.6.9something), both with R 3.3.1 and R 3.4.4. Do you have a chance to test this?

Note that I did not load the tensor lib (in fact I did not even install it). Is that required to reproduce the bug?
Comment 3 Jan 2018-04-16 06:24:38 UTC
Thank you for solving the problem. I use Ubuntu 14.04. In the RKWard-ppa the new version is not available for Trusty (which is still supported as a LTS-version of Ubuntu). Can the new version of RKWard provided for this version of Ubuntu so that I can test it?
Comment 4 Thomas Friedrichsmeier 2018-04-16 08:43:26 UTC
As much as I would like to give you a better answer, I am afraid RKWard 0.7.0 will not become available for Ubuntu 14.04. As far as I can see, there are simply no KF5 libraries available for Trusty.

What you _could_ do is to try the daily builds on the kde4 branch at https://launchpad.net/~rkward-devel/+archive/ubuntu/rkward-dailys-cran . These have few fixes on top of 0.6.5 (*).

We will probably create another bugfix release based on this, shortly after R 3.5.0 is out (for users like you, who are still stuck with KDE4). However, the KDE4 branch is not going to see any significant development beyond this, as we simply do not have the resources for that.

---

(*) To be honest, I'll be surprised, if these solve your issue. However, I have just tested, and could not reproduce the issue. Can you confirm that I should be seeing the bug when loading your .Rdata file, with library(tensorflow) loaded?
Comment 5 Jan 2018-04-17 08:40:21 UTC
I was able to test the bugfix on another system with Ubuntu 16.04. Unfortunately, the error still occurs.

Loading library(tensorflow) and my attached Rdata-file doesn't reproduce the bug.

These commands are necessary to generate the bug:

library(keras)
input_1 <- layer_input(shape=c(100))
Comment 6 Thomas Friedrichsmeier 2018-04-17 09:16:22 UTC
Git commit c97ab062227cd414578bc67d93832ca8e957dcda by Thomas Friedrichsmeier.
Committed on 17/04/2018 at 09:15.
Pushed by tfry into branch 'master'.

Do not get confused by non-numeric dim().

M  +1    -0    ChangeLog
M  +1    -1    rkward/rbackend/rkstructuregetter.cpp

https://commits.kde.org/rkward/c97ab062227cd414578bc67d93832ca8e957dcda
Comment 7 Thomas Friedrichsmeier 2018-04-17 09:18:05 UTC
Git commit 9ff8e2fa96bb6e42c58a86160ceb89e3c79f7bde by Thomas Friedrichsmeier.
Committed on 17/04/2018 at 09:17.
Pushed by tfry into branch 'kde4'.

Do not get confused by non-numeric dim().

M  +1    -0    ChangeLog
M  +1    -1    rkward/rbackend/rkstructuregetter.cpp

https://commits.kde.org/rkward/9ff8e2fa96bb6e42c58a86160ceb89e3c79f7bde
Comment 8 Thomas Friedrichsmeier 2018-04-17 09:27:44 UTC
Thanks. I had tried to shortcut installing keras, but that turned out to be needed to reproduce.

This should now be fixed both for the KF5 and the KDE4 version (but not in any official release, yet).