Version: 3.0.2 (using KDE KDE 3.2.1) Installed from: SuSE RPMs OS: Linux When adding an explicite dependency in the Automake Manager (I tried it in a subproject), it is correctly inserted in Makefile.am in that directory. When taking the dependency out again using the Automake Manager, the dependency does not appear in the Automake Manager any more but is not removed from Makefile.am. Removing it from there by hand led to the expected result.
Fixed in svn branch 3.4, Committed revision 612393